Insertion junction: CLIP2.017817_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.017817
Chromosome:chromosome 2
Location:1264647
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g082000 AGE1 DNA repair glycosylase; (1 of 1) K03575 - A/G-specific adenine glycosylase (mutY) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTGGCCTTATGCTTGGGCGGGAGCTTCCGGCAGCCCGAGCCCTTCAGC
Internal bar code:TGTACTGAGTTTAGAACTAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1166
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTTCCCAGTGCCTTCCTC
Suggested primer 2:CATCTCATTTGGCGCGAAGG