Insertion junction: CLIP2.017829_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.017829
Chromosome:chromosome 11
Location:4084016
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g481050 (1 of 10) PF00505 - HMG (high mobility group) box (HMG_box); High mobility group protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCACCCCACTGCTGATTGGGACCGCACCCGACTGGTTGGGACCGCACC
Internal bar code:TCGAAAAGTGGTGTAAGAAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1767
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGTGTGGACATGTCTCAC
Suggested primer 2:GACTGATTGGGACCGCACC