Insertion junction: CLIP2.017830_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.017830
Chromosome:chromosome 7
Location:2351115
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g328250 Pumilio-family RNA binding protein; (1 of 2) K17943 - pumilio RNA-binding family (PUM) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTATCCGTTAAGTAACCCCGGCGCCGCTTGGGCGGGCTTCGTTTTGTT
Internal bar code:CTTCTAGTAAAGCAAGTGTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:602
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCCTGTTGCGCACTCTAG
Suggested primer 2:TTGGGAACAGTATCGTGGGC