Insertion junction: CLIP2.017838_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.017838
Chromosome:chromosome 13
Location:4261233
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g592100 (1 of 1) PF00097//PF00628 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) // PHD-finger (PHD) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCCTCAGCAGCAGCGCCAGCGACCCCGAGCCCGACACAGGCAGCGCCC
Internal bar code:TTACGGGTGAATTACGGTTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3186
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCCTTATGACATGGGCGT
Suggested primer 2:GTCCGCTGTAAAGTCAACGC