Insertion junction: CLIP2.017843_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.017843
Chromosome:chromosome 17
Location:3475140
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g723850 (1 of 1) PF06775 - Putative adipose-regulatory protein (Seipin) (Seipin) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGTTGTGCAGGGGTGTGTAAGTAGTCACGACTAGTAGCCCGCAAGCC
Internal bar code:GTCAATTGCCTCGTAGTCCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2087
LEAP-Seq percent confirming:96.875
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCTCAGGTCCTGTCTCGT
Suggested primer 2:TTGAGGAGGAGGACGAGGAG