Insertion junction: CLIP2.017844_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.017844
Chromosome:chromosome 4
Location:526834
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217931 P4H14,PFH14 Prolyl 4-hydroxylase 14; (1 of 2) IPR003582//IPR005123//IPR006620//IPR027450 - ShKT domain // Oxoglutarate/iron-dependent dioxygenase // Prolyl 4-hydroxylase, alpha subunit // Alpha-ketoglutarate-dependent dioxygenase AlkB-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGAAGTTGTCTTATACGCATCTCAGGTTTGAATGAAGCCTGATGACGGA
Internal bar code:CAGATGGCCAACAGAGTACTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2628
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:100

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCAGTTGCAGTATCTTCG
Suggested primer 2:GGCCCCCTTCCATTTCTGAA