Insertion junction: CLIP2.017858_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.017858
Chromosome:chromosome 1
Location:5112708
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g035700 (1 of 781) IPR000104 - Antifreeze protein, type I intron
Cre01.g800093 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACACACACACACACACAAACTCCGCCTCTCTTGTCGCCGTTGCCATTC
Internal bar code:TCGATTGTCAACCGTAACTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4605
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAAGCTGTTCTCGGGGAA
Suggested primer 2:ACAGGGTCTGCAAGTTAGCC