Insertion junction: CLIP2.017869_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.017869
Chromosome:chromosome 7
Location:6108183
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g355600 NTR3 NADPH dependent thioredoxin reductase 3; (1 of 2) PTHR22912//PTHR22912:SF183 - DISULFIDE OXIDOREDUCTASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCAAAAACGGCTCAGTCTATGACCCACTTCTCCTAGGGACACCCCCCG
Internal bar code:ATGGGCTTAAAGTCCTGTTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:802
LEAP-Seq percent confirming:40.9091
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TCATGAGCATTTGCATGGCG
Suggested primer 2:TGATCCTGCAGCAGTGTGAG