Insertion junction: CLIP2.017869_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.017869
Chromosome:chromosome 7
Location:6108186
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g355600 NTR3 NADPH dependent thioredoxin reductase 3; (1 of 2) PTHR22912//PTHR22912:SF183 - DISULFIDE OXIDOREDUCTASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTAGTTTAATGCGTTGCTCCCTCCGTCCCCTTCTGTAATCAACAGTCCG
Internal bar code:ATGGGCTTAAAGTCCTGTTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1225
LEAP-Seq percent confirming:41.8605
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:TGATCCTGCAGCAGTGTGAG
Suggested primer 2:TCATGAGCATTTGCATGGCG