Insertion junction: CLIP2.017885_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.017885
Chromosome:chromosome 9
Location:3706666
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397327 (1 of 1) PTHR11139:SF68 - DNA-DEPENDENT PROTEIN KINASE CATALYTIC SUBUNIT CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCGCCTGCCCCAGCCGCCGCACCGCCAGCCGCGGCCGCCCCGCCGCCT
Internal bar code:CTGCGACAGAGCAGGGTGTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2054
LEAP-Seq percent confirming:53.8462
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CTACAGCCGGCATCACTCAA
Suggested primer 2:GATAAGGACCACCGCCTAGC