Insertion junction: CLIP2.017894_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.017894
Chromosome:chromosome 7
Location:2197388
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre07.g327150 (1 of 2) IPR001810//IPR003347 - F-box domain // JmjC domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCATGCATGTTAAATAAGACGAGAGGGCGTAGCCACGAGCAATAGGGGT
Internal bar code:GCGTCGGTTGGGGTCTATGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:284
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TACGTCGACTACATGGCACG
Suggested primer 2:GGTCACACACACACACATGC