Insertion junction: CLIP2.017895_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.017895
Chromosome:chromosome 8
Location:4071023
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g383000 (1 of 1) IPR000104//IPR001471//IPR016177//IPR031112 - Antifreeze protein, type I // AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGTAGCAGCAGCAATGGTAGGGGGAGCACCGCCGCCGCTGCTCTCGCG
Internal bar code:GCAATTTCAGTCGGGCAAAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3243
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTCCGAGAGTCGTGTCCT
Suggested primer 2:CTTCTCCTCCTCCTCAGGCT