Insertion junction: CLIP2.017901_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.017901
Chromosome:chromosome 9
Location:4588888
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401441 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTGGAACCGCTAGTGTATCCCAAGAACTTGGCTGTCGACTTCAGCAGC
Internal bar code:GCCTAGATCGTCAATCTGGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4321
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TGATGCAAACATTCGGCTGC
Suggested primer 2:TCTTTGCACGCGTGAAACTG