Insertion junction: CLIP2.017909_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.017909
Chromosome:chromosome 2
Location:843122
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g078858 PSN1 Presenilin protease; (1 of 1) K04505 - presenilin 1 (PSEN1, PS1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCACTTGAATATGTATGCTTCACATATCTTAACATCACCCACACGCTAA
Internal bar code:CACTCTATGTAAAGTTACAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2361
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GCAACGGCACAGTTTTACGT
Suggested primer 2:GAAGATGTCTCGGCTACGGG