Insertion junction: CLIP2.017923_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.017923
Chromosome:chromosome 17
Location:5929236
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g741950 BBS1 Bardet-Biedl syndrome-1 associated protein; (1 of 1) K16746 - Bardet-Biedl syndrome 1 protein (BBS1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTGTATGGAAGCGATTTGTTGGGGTTTGTAAGGTCAACTTCGGGAGCG
Internal bar code:GGGAGCTTGTTTAGTAGGGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1659
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCGCCGAAGAACAACAAG
Suggested primer 2:GGTACTCCACTGATACGGCG