Insertion junction: CLIP2.017929_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.017929
Chromosome:chromosome 2
Location:3983988
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g102650 (1 of 55) PTHR23257//PTHR23257:SF394 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCCTCGTGCGGCAGCTGGCCGGTGGTCAGGTGCCACGTCAGCGCGCCG
Internal bar code:CTATCGCCGCCGCAGAGTTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3385
LEAP-Seq percent confirming:55.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCATCCATCGTGTTTCGC
Suggested primer 2:ATGCCAGCAGTGTCCGTTTA