Insertion junction: CLIP2.017937_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.017937
Chromosome:chromosome 5
Location:469288
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g800519 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATGCGAGTCCACCGGCAGCCGGCACCGTGCCAATCGGCACGAACCCGG
Internal bar code:TTGGGGGTTTGTGACGAAACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2310
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CATAGCCCCTGTAGAGCAGC
Suggested primer 2:CCCCAAGTCTTCCTCGTCAC