Insertion junction: CLIP2.017942_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.017942
Chromosome:chromosome 12
Location:8988627
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g545150 (1 of 2) PTHR21514//PTHR21514:SF0 - UNCHARACTERIZED // AP-4 COMPLEX ACCESSORY SUBUNIT TEPSIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCGCATTGCGAAGCGGCTGCAGAACAAGTCGCCGGTAGTCAAGTATAA
Internal bar code:GCGTCCCACGTTAGTGTCTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:571
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CATCCAACACCTCCCACCTC
Suggested primer 2:CTGGAGCAGCGACTCTTCTC