Insertion junction: CLIP2.017944_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.017944
Chromosome:chromosome 17
Location:3231516
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g721600 (1 of 1) K12847 - U4/U6.U5 tri-snRNP-associated protein 2 (USP39, SAD1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGATGAAGACACGAAACCTGGCCAGGCCTTGAGGGGAGGGGGCTCGGG
Internal bar code:GTCGGTGTTTGCTGGTATTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:554
LEAP-Seq percent confirming:78.2609
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGTTGAGTTTGGGCTGGT
Suggested primer 2:CACACGCACAAAGTCCCTTG