| Insertion cassette: | CIB2 |
| Side of cassette: | 3' |
| Strand: | + |
| Strain: | CLIP2.017956 |
| Chromosome: | chromosome 9 |
| Location: | 5543751 |
| Confidence (%): | 80 |
| Locus systematic id | Locus common name | Defline | Feature |
|---|---|---|---|
| Cre09.g801075 | 5'UTR | ||
| lncRNA_TCONS_00156899 | 5'UTR |
Insertion site details | |
| Expected flanking sequence (starting at cassette; orientation from cassette outwards): | CTACACGAAGCGGAAACGAATGGCCGCATGAATTTGCGACAGCCCCGCGG |
| Internal bar code: | TCGTTTATTTGACGTCGAGGCC |
Confirmation - LEAP-Seq | |
| LEAP-Seq distance: | 2482 |
| LEAP-Seq percent confirming: | 100.0 |
| LEAP-Seq n confirming: | 39 |
| LEAP-Seq n nonconfirming: | 0 |
| LEAP-Seq n unique pos: | 39 |
Suggested primers for confirmation by PCR | |
| Suggested primer 1: | AAAGTCGCGACTAAGTGGGG |
| Suggested primer 2: | TCCTTCGGCACTCCAATCAC |