Insertion junction: CLIP2.017957_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.017957
Chromosome:chromosome 6
Location:2617575
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g270050 (1 of 587) 2.7.11.1 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase CDS
Cre06.g270100 SBE2a,SBE2 (1 of 3) 2.4.1.18 - 1,4-alpha-glucan branching enzyme / Glycogen branching enzyme; Starch Branching Enzyme 2 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAGCCGCTGCCCTCGTCACGGAGCGCCGAGCCGCCGCCGCCATCACCAT
Internal bar code:ATGAGACTGCGGAGGATGACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2626
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCAGGTCGTCGTAGAACC
Suggested primer 2:CGCCAGAGGTCTTGGACTTT