Insertion junction: CLIP2.017968_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.017968
Chromosome:chromosome 17
Location:3176571
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g721000 ABCA5 (1 of 2) PTHR19229//PTHR19229:SF127 - ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA // SUBFAMILY NOT NAMED; ABC transporter 5 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTGGACATCGCTGAAGGCGTGGTCACCGAGGACGCCAGCGGCGGCGGC
Internal bar code:CATGCCCCACTGGGTAAACAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:579
LEAP-Seq percent confirming:27.3973
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:53
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTTGGCATACGAGCTGTG
Suggested primer 2:CAAGCGTCATGATCTGTGCG