Insertion junction: CLIP2.017973_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.017973
Chromosome:chromosome 3
Location:8207772
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g200351 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAAAGGGCTCGTGGACAAGCAACAAGGTTGTTGGTGGTTGGGTGCAGGA
Internal bar code:AGCGGTTGTCAACTGTTAGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1974
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GCACGCAATGTCAAGGTTGT
Suggested primer 2:CATTTGCGTGGATGCCTAGC