Insertion junction: CLIP2.017976_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.017976
Chromosome:chromosome 3
Location:5562493
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185350 BGS3,CALS1,GTR9,GTR15 Callose synthase 1; (1 of 2) K11000 - callose synthase [EC:2.4.1.-] Glc b1-3 Glc (CALS) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCGCTCATGCATCGCGCCCACCAGCGCACCGGCGCGCGGTGGAACTCC
Internal bar code:TCTTTCTAGGAAAATTCTAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2083
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGTCATGGCCAAGAGCTA
Suggested primer 2:CAGGCGAGTGAACATGAGGT