Insertion junction: CLIP2.017976_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.017976
Chromosome:chromosome 3
Location:5562510
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185350 BGS3,CALS1,GTR9,GTR15 Callose synthase 1; (1 of 2) K11000 - callose synthase [EC:2.4.1.-] Glc b1-3 Glc (CALS) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGCGGCGGCCGCGGCCTCCGTGGCGCGGCGGCAGCACGCAATCACAGG
Internal bar code:TCTTTCTAGGAAAATTCTAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3502
LEAP-Seq percent confirming:61.5385
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGCGAGTGAACATGAGGT
Suggested primer 2:GCAGTCATGGCCAAGAGCTA