Insertion junction: CLIP2.017977_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.017977
Chromosome:chromosome 9
Location:1353625
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400400 (1 of 1) IPR002809//IPR008568 - Protein of unknown function DUF106, transmembrane // Uncharacterised conserved protein UCP010045, transmembrane eukaryotic intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAACGTGTGACACCGCTCATACCGTACTGGTCCCCCCTTCGGGGGCCG
Internal bar code:CCACCTAAGGGGGGGAGGCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2036
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GGCATCAAATTCGTCGCCTC
Suggested primer 2:GTGTTTTACACGCCCCACAC