Insertion junction: CLIP2.017987_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.017987
Chromosome:chromosome 10
Location:4384253
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g450100 (1 of 1) K04957 - hyperpolarization activated cyclic nucleotide-gated potassium channel 4 (HCN4) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGCGCTGGTGCCCCTGCCTGCGGCCTTGCGGTGGTTGCCGTCCTTCC
Internal bar code:CGGGTCATTAGGGTTGCCCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:949
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TGGATGTGATGGTGGTGCAG
Suggested primer 2:CAATAGCCCAATTGCGTCCG