Insertion junction: CLIP2.017993_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.017993
Chromosome:chromosome 6
Location:5447821
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g285900 FAP396 (1 of 2) IPR000104//IPR003590 - Antifreeze protein, type I // Leucine-rich repeat, ribonuclease inhibitor subtype; Flagellar Associated Protein 396 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCACGGGCGACCATTCGGCCTGACCCCGCGATGCACCTGTATGCGTCCA
Internal bar code:TGGGGCTATAGGCGTATCGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1051
LEAP-Seq percent confirming:38.4615
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CACACACACACACACACAGC
Suggested primer 2:ATCATGGACGCAAACCCCAT