Insertion junction: CLIP2.017999_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.017999
Chromosome:chromosome 16
Location:2697049
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661750 (1 of 2) PF08332 - Calcium/calmodulin dependent protein kinase II association domain (CaMKII_AD) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGCCCTATCCCCGTACGTGACGCGTGCAGTTGGCACCAAGGGTTCGTG
Internal bar code:GTGCACCGGAACGTGAAATGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:871
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCATACGATAGGCACCGC
Suggested primer 2:TTTGTGCCATGCAGCTTGAC