Insertion junction: CLIP2.018002_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.018002
Chromosome:chromosome 7
Location:1351680
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g322650 CSA1 Chlorophyceae-specific gene family A protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCCGCTCTCTCCCACCCCTTCCCCCGCCTCACGTGATGTCCACCCCCA
Internal bar code:TGTGGTTCTGCGGAACCGACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1433
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGCTTATGCTTCACTCAC
Suggested primer 2:CGTTCATCTGCTCAATGCCG