Insertion junction: CLIP2.018010_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.018010
Chromosome:chromosome 17
Location:1659348
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCACCAACCTGCCTTAACACTGTGCCATCGCACACCCAACTTTGTGCCC
Internal bar code:GTAAAAATGGTAAAGGTGCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2154
LEAP-Seq percent confirming:78.5714
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTCACCACATCATGCCT
Suggested primer 2:CAGGCGATAATGTTGCGGTG