Insertion junction: CLIP2.018013_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.018013
Chromosome:chromosome 12
Location:4968796
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g524800 (1 of 4) IPR005819 - Histone H5 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCCGGCCTCACAGGCTGCCAAGCCCAAGGCTGCTCCCAAGGCCAAGGC
Internal bar code:GGGCTAAGGAGTTTCCGAATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2578
LEAP-Seq percent confirming:90.566
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GTAACCCCTGGTGGTAAGGC
Suggested primer 2:ATTATAATGGCCGGTCGCGT