Insertion junction: CLIP2.018015_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.018015
Chromosome:chromosome 10
Location:1520358
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g428720 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCCGAGCCGCCGCTCCCGCCTCCGGCGCCGCTGGTGCTGCTATCAGC
Internal bar code:CCTGATTTCCACTAATCCGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3965
LEAP-Seq percent confirming:97.0588
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGCCGATGCAGAAATCGC
Suggested primer 2:CAAACACACACACTGGCGAG