Insertion junction: CLIP2.018019_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.018019
Chromosome:chromosome 1
Location:6118920
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g043500 (1 of 1) PTHR20882//PTHR20882:SF14 - FAMILY NOT NAMED // CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCGTGAAGATGGTCGATGGCAGGTTGGCCTGCATTGAAAGCAACGTAG
Internal bar code:TTTTGATGTTCTTTATATTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:3333
LEAP-Seq percent confirming:82.4324
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCAACGATGCCGCATAAC
Suggested primer 2:GAAAGCCTTGGTTTGCTGGG