Insertion junction: CLIP2.018031_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.018031
Chromosome:chromosome 3
Location:4801340
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g178000 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGACTGGAGGCCGCCCTGGGTGGGCTGGGCGGACTGACGGAGCGGGTA
Internal bar code:CGACTTACCGCCAAGGGGCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1366
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGAATTGGCTATGCACGG
Suggested primer 2:CCCGAGGTTGTGGCAAAAAG