Insertion junction: CLIP2.018058_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.018058
Chromosome:chromosome 7
Location:521249
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g316100 (1 of 1) PTHR21512//PTHR21512:SF5//PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9 // FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCATCCCGTGGAGCTTCCCCTGGACATCCCATTGGCCCCAGCCGCCACA
Internal bar code:CGCAATGCATGTGTGTGTTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:601
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAAGTTATAGCCAGGCGC
Suggested primer 2:CTGCAGGGCACATGTTGAAC