Insertion junction: CLIP2.018058_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.018058
Chromosome:chromosome 7
Location:521283
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g316100 (1 of 1) PTHR21512//PTHR21512:SF5//PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9 // FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCAGGTCCGAAATGCACAGCTCTCACACCCGCTTGCGGACCGCAGGGC
Internal bar code:TTTGTTGGAAGGGTAGTACCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:335
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCAGGGCACATGTTGAAC
Suggested primer 2:GCAAAGTTATAGCCAGGCGC