Insertion junction: CLIP2.018067_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.018067
Chromosome:chromosome 10
Location:4833992
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g453300 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGGCCGCCATCGGTGCTGTCCGCACAACGGTGATCGGGGAGGCAGCGG
Internal bar code:TGAGAGGTTTTCGAGGGCTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3989
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCTGCCATCTTGACGTCT
Suggested primer 2:GCAAGTCTGACCGGCTAACT