Insertion junction: CLIP2.018079_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.018079
Chromosome:chromosome 14
Location:3485017
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g630600 (1 of 12) IPR000104//IPR002893 - Antifreeze protein, type I // Zinc finger, MYND-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCGCCGCCGTATCCGCAGTCCGCTGCGTGCGGGCACGGGTCAGGGCTG
Internal bar code:GTAATGTTCTTTGCGACCTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:840
LEAP-Seq percent confirming:9.09091
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGCAACCCACCTATTGT
Suggested primer 2:GTACCGCTCAGCCAACTCTT