Insertion junction: CLIP2.018091_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.018091
Chromosome:chromosome 7
Location:5387570
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g350450 (1 of 2) PTHR22763:SF71 - PROTEIN Y105C5B.11, ISOFORM B intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGGTTCTGGTGGAAACACGTGCTTGTAGGCCCTGTTGCATGTAACTCC
Internal bar code:GACAATAGAGACCGTTTAAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1552
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CGGAATTCTGCATGCACTCG
Suggested primer 2:GTGAAGCACATTCGCGGTAC