Insertion junction: CLIP2.018095_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.018095
Chromosome:chromosome 8
Location:2866353
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g374150 (1 of 11) IPR011146 - HIT-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAGGCTGGCAGGCTGGCACGGACGCCCCCACTCACCATGCCTGCTCCA
Internal bar code:GGGTAACCTGAGCTGATATAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1549
LEAP-Seq percent confirming:75.6757
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:ATTTGGCCAGACTTCGGAGG
Suggested primer 2:TGCATCGGGCTCGTTTTAGT