Insertion junction: CLIP2.018106_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.018106
Chromosome:chromosome 13
Location:3175616
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g585100 (1 of 2) IPR002014//IPR008942 - VHS domain // ENTH/VHS intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAACATACGTCCATGTTGCGTGCGTGTTCCACGGACTGCCGCACCTCC
Internal bar code:CCGCTGCTTACACGTACGTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4166
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:87
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGATATGTTACCACGGGG
Suggested primer 2:GGCGGCATGTACAGTTACCT