Insertion junction: CLIP2.018117_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.018117
Chromosome:chromosome 16
Location:5958855
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g678850 (1 of 1) 2.3.3.10 - Hydroxymethylglutaryl-CoA synthase / Hydroxymethylglutaryl coenzyme alpha-condensing enzyme CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCATCCAAGCCACAGCCACGCCCTAGCGCCACACCTGGTCCCGAGGCT
Internal bar code:AGTTTGGTCCCTACGAATGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:3055
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TCCACAATGCCAACCCCTTT
Suggested primer 2:TAAGACATCGCATCCTCGCC