Insertion junction: CLIP2.018118_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.018118
Chromosome:chromosome 9
Location:450931
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g800980 (1 of 4) 1.1.1.3 - Homoserine dehydrogenase intron
Cre18.g749347 (1 of 1) PTHR14580//PTHR14580:SF0 - UNCHARACTERIZED // MULTIPLE MYELOMA TUMOR-ASSOCIATED PROTEIN 2 3'UTR_intron
Cre18.g749397 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTACCGCCTCCTGCTCCGCCTCGCGGATACGTGGGTGTGGTGGACGCC
Internal bar code:CTTCCAACGCGGTCTCACCCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2026
LEAP-Seq percent confirming:54.386
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTCGATGGGCTCACTACG
Suggested primer 2:GGCAATCCCTCCTCCTCAAC