Insertion junction: CLIP2.018120_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.018120
Chromosome:chromosome 3
Location:1280613
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g150050 (1 of 6) 3.1.3.4 - Phosphatidate phosphatase / Phosphatidic acid phospphatase CDS
Cre03.g150101 NRT2D Nitrate/nitrite transporter; (1 of 5) PTHR23515//PTHR23515:SF2 - FAMILY NOT NAMED // HIGH AFFINITY NITRATE TRANSPORTER 2.3-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCAAGAGAGTCCACCAACATCCTAGCTATAGCATTTGTCAAACGAAC
Internal bar code:AATGGCGAAGTAACACGGGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1372
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:AACGTGAAGCACCCACCTAG
Suggested primer 2:TGTAGGTGCTCACAGCCATG