Insertion junction: CLIP2.018122_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.018122
Chromosome:chromosome 3
Location:6088854
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800354 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAAACCGCGCGTCAGCAAAACATAGCATACTGGCGCAAACCGCGACTG
Internal bar code:ATATTGTATTAGATGTCAGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1652
LEAP-Seq percent confirming:10.7143
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCCTCCGAGCGCTATATA
Suggested primer 2:ATGCAAGCAGAGGTGTCTCC