Insertion junction: CLIP2.018123_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.018123
Chromosome:chromosome 6
Location:710108
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g254700 (1 of 1) K18716 - nucleoporin NUP42 (NUP42, RIP1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCGCGCCCAACCAGAGGCCCCACCGCACCTGCATGTTGGTCCAGCGCG
Internal bar code:AAAGTGTTGGCGGCTCGATCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:963
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGGAAGGAGGGAACGAGG
Suggested primer 2:GAGAAGCGTGGAGTACCGAG