Insertion junction: CLIP2.018123_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.018123
Chromosome:chromosome 6
Location:710108
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g254700 (1 of 1) K18716 - nucleoporin NUP42 (NUP42, RIP1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTTGCGTGCCCACATAGATGGAGAGACGTGGGATACCGCTGTACGGCT
Internal bar code:GGGCAGTTGAGAGTACCGTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3465
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAAGCGTGGAGTACCGAG
Suggested primer 2:TAGGGAAGGAGGGAACGAGG