Insertion junction: CLIP2.018128_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.018128
Chromosome:chromosome 3
Location:4319574
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g174400 CDO1 Cysteine dioxygenase, regulated by copper nutrition; (1 of 2) 1.13.11.20 - Cysteine dioxygenase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATCTTGACGCGGCGAATCGGGGGGGCGTAGCAGTGCAGCGTCACCCCGC
Internal bar code:CCGGGTTTCGTTAAGCGGTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2660
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGGTGGATGCCAATGAG
Suggested primer 2:CGCAAGCGTACACACCAAAA