Insertion junction: CLIP2.018159_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.018159
Chromosome:chromosome 13
Location:1382232
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g571800 (1 of 4) PF07059 - Protein of unknown function (DUF1336) (DUF1336) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCAACCTGCAGAGTACTTCGACTGCGCGGAGCAGTTCTCAGTGGGAGAA
Internal bar code:TGACCCGTACCAGACGACCCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:649
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GGATGTTTCGCTTGTGCCAG
Suggested primer 2:TTTACGCCAGGTGACCACTC